Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CHRNB2P17787 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHRNB2P17787 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNB2P17787 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHRNB2P17787 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB2P17787 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHRNB2P17787 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNB2P17787 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.56■□□□□ 0.72
CHRNB2P17787 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB2P17787 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.56■□□□□ 0.72
CHRNB2P17787 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNB2P17787 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNB2P17787 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHRNB2P17787 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNB2P17787 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNB2P17787 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 AL096828.2-201ENST00000567259 1965 ntBASIC19.55■□□□□ 0.72
CHRNB2P17787 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 LINC01126-201ENST00000623515 1646 ntBASIC19.55■□□□□ 0.72
CHRNB2P17787 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNB2P17787 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHRNB2P17787 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 AC128688.1-201ENST00000487626 519 ntBASIC19.55■□□□□ 0.72
CHRNB2P17787 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.55■□□□□ 0.72
CHRNB2P17787 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
CHRNB2P17787 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.55■□□□□ 0.72
CHRNB2P17787 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHRNB2P17787 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNB2P17787 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB2P17787 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB2P17787 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CHRNB2P17787 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB2P17787 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB2P17787 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.54■□□□□ 0.72
CHRNB2P17787 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNB2P17787 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNB2P17787 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB2P17787 AC009947.2-201ENST00000444014 672 ntBASIC19.54■□□□□ 0.72
CHRNB2P17787 SEC1P-202ENST00000473944 940 ntBASIC19.54■□□□□ 0.72
CHRNB2P17787 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.54■□□□□ 0.72
CHRNB2P17787 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.54■□□□□ 0.72
CHRNB2P17787 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNB2P17787 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB2P17787 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB2P17787 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNB2P17787 AC067852.2-201ENST00000590513 2313 ntBASIC19.54■□□□□ 0.72
CHRNB2P17787 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHRNB2P17787 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB2P17787 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNB2P17787 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 AC138028.4-201ENST00000564984 1845 ntBASIC19.53■□□□□ 0.72
CHRNB2P17787 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHRNB2P17787 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNB2P17787 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNB2P17787 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNB2P17787 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNB2P17787 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB2P17787 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms