Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRAFP15056 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
BRAFP15056 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRAFP15056 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19■□□□□ 0.63
BRAFP15056 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRAFP15056 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BRAFP15056 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRAFP15056 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRAFP15056 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BRAFP15056 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.99■□□□□ 0.63
BRAFP15056 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.99■□□□□ 0.63
BRAFP15056 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.99■□□□□ 0.63
BRAFP15056 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
BRAFP15056 BX088651.1-201ENST00000540551 451 ntBASIC18.99■□□□□ 0.63
BRAFP15056 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.99■□□□□ 0.63
BRAFP15056 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRAFP15056 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
BRAFP15056 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 AC139713.2-201ENST00000641328 2723 ntBASIC18.98■□□□□ 0.63
BRAFP15056 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.98■□□□□ 0.63
BRAFP15056 AC116562.2-201ENST00000507042 360 ntBASIC18.98■□□□□ 0.63
BRAFP15056 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.98■□□□□ 0.63
BRAFP15056 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.98■□□□□ 0.63
BRAFP15056 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.98■□□□□ 0.63
BRAFP15056 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.98■□□□□ 0.63
BRAFP15056 AL031985.4-201ENST00000642138 673 ntBASIC18.98■□□□□ 0.63
BRAFP15056 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.98■□□□□ 0.63
BRAFP15056 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.98■□□□□ 0.63
BRAFP15056 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
BRAFP15056 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRAFP15056 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
BRAFP15056 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
BRAFP15056 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
BRAFP15056 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.97■□□□□ 0.63
BRAFP15056 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.97■□□□□ 0.63
BRAFP15056 AC012313.1-201ENST00000593393 3059 ntBASIC18.97■□□□□ 0.63
BRAFP15056 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
BRAFP15056 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BRAFP15056 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
BRAFP15056 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.97■□□□□ 0.63
BRAFP15056 MESTP1-201ENST00000404287 994 ntBASIC18.97■□□□□ 0.63
BRAFP15056 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.97■□□□□ 0.63
BRAFP15056 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BRAFP15056 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.97■□□□□ 0.63
BRAFP15056 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.97■□□□□ 0.63
BRAFP15056 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.97■□□□□ 0.63
BRAFP15056 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.97■□□□□ 0.63
BRAFP15056 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BRAFP15056 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRAFP15056 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.97■□□□□ 0.63
BRAFP15056 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BRAFP15056 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
BRAFP15056 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.96■□□□□ 0.63
BRAFP15056 AC026271.3-201ENST00000571884 352 ntBASIC18.96■□□□□ 0.63
BRAFP15056 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.96■□□□□ 0.63
BRAFP15056 AC073912.3-201ENST00000624414 853 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms