Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDH7O60245 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH7O60245 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDH7O60245 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDH7O60245 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDH7O60245 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH7O60245 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH7O60245 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH7O60245 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH7O60245 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH7O60245 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH7O60245 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDH7O60245 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH7O60245 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 AC135776.1-201ENST00000319817 2481 ntBASIC17.63■□□□□ 0.41
PCDH7O60245 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH7O60245 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH7O60245 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PCDH7O60245 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH7O60245 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH7O60245 C2orf69P3-201ENST00000565542 1120 ntBASIC17.63■□□□□ 0.41
PCDH7O60245 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH7O60245 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH7O60245 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH7O60245 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH7O60245 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCDH7O60245 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH7O60245 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 NOC2LP1-202ENST00000452600 2235 ntBASIC17.62■□□□□ 0.41
PCDH7O60245 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PCDH7O60245 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH7O60245 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH7O60245 MIR4497-201ENST00000583208 89 ntBASIC17.62■□□□□ 0.41
PCDH7O60245 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 AC116562.4-202ENST00000641738 218 ntBASIC17.62■□□□□ 0.41
PCDH7O60245 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH7O60245 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 AC092338.2-201ENST00000568827 1415 ntBASIC17.62■□□□□ 0.41
PCDH7O60245 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH7O60245 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDH7O60245 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH7O60245 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH7O60245 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH7O60245 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH7O60245 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH7O60245 BX088651.1-201ENST00000540551 451 ntBASIC17.61■□□□□ 0.41
PCDH7O60245 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH7O60245 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH7O60245 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH7O60245 CR769767.2-201ENST00000622735 460 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms