Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC066615.1-201ENST00000640911 628 ntBASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC092865.7-201ENST00000641832 219 ntBASIC16.33■□□□□ 0.2
NPIPB4C9JG80 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 LINC01568-207ENST00000641790 1380 ntBASIC16.33■□□□□ 0.2
NPIPB4C9JG80 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC093010.1-201ENST00000473625 1624 ntBASIC16.33■□□□□ 0.2
NPIPB4C9JG80 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 ECEL1P2-202ENST00000465689 757 ntBASIC16.32■□□□□ 0.2
NPIPB4C9JG80 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 AL096828.2-201ENST00000567259 1965 ntBASIC16.32■□□□□ 0.2
NPIPB4C9JG80 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB4C9JG80 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 AL024508.2-201ENST00000607749 1894 ntBASIC16.31■□□□□ 0.2
NPIPB4C9JG80 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 MIR3917-201ENST00000580971 93 ntBASIC16.31■□□□□ 0.2
NPIPB4C9JG80 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB4C9JG80 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms