Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 DGCR10-201ENST00000609839 495 ntBASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 FITM1-202ENST00000559294 800 ntBASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 AC145285.6-201ENST00000604632 637 ntBASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB3Q9Y5G1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 HTR7P1-202ENST00000624664 4411 ntBASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 AP000692.2-201ENST00000608391 879 ntBASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB3Q9Y5G1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 AC011506.1-201ENST00000474329 610 ntBASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGB3Q9Y5G1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms