Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 AL136038.3-201ENST00000561909 1096 ntBASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 MIR3180-5-201ENST00000583743 153 ntBASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 AC112907.2-201ENST00000448639 330 ntBASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 AC008556.1-201ENST00000610908 2040 ntBASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 Z98044.1-201ENST00000632503 1764 ntBASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB11Q9Y5F2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB11Q9Y5F2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 AC026396.1-201ENST00000419388 421 ntBASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 ZNF444P1-201ENST00000559497 298 ntBASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 CR769767.2-201ENST00000622735 460 ntBASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 AC138932.1-201ENST00000534164 6830 ntBASIC18.08■□□□□ 0.48
PCDHB11Q9Y5F2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 DUSP5P1-201ENST00000441325 1139 ntBASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB11Q9Y5F2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms