Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 AL023284.2-201ENST00000405850 579 ntBASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 KRT8P45-201ENST00000414328 1447 ntBASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 AC112777.1-201ENST00000540175 1423 ntBASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RNF11Q9Y3C5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF11Q9Y3C5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RNF11Q9Y3C5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF11Q9Y3C5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF11Q9Y3C5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF11Q9Y3C5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 AC008550.1-201ENST00000511500 884 ntBASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 AP003071.4-201ENST00000562276 1284 ntBASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 TMEM191A-211ENST00000637163 1067 ntBASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 MYC-208ENST00000641036 567 ntBASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 AC106820.2-201ENST00000563775 3264 ntBASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF11Q9Y3C5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF11Q9Y3C5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF11Q9Y3C5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms