Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 AL136038.3-201ENST00000561909 1096 ntBASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 AL136038.4-201ENST00000603606 1261 ntBASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 ANO7L1-203ENST00000602586 1720 ntBASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
VAT1LQ9HCJ6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
VAT1LQ9HCJ6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VAT1LQ9HCJ6 IER3-202ENST00000376377 1350 ntBASIC21.39■■□□□ 1.02
VAT1LQ9HCJ6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 AC091076.1-201ENST00000610741 619 ntBASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 AP000550.4-202ENST00000639755 178 ntBASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 AC018445.3-201ENST00000624177 1945 ntBASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 AL163051.1-201ENST00000569214 1512 ntBASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
VAT1LQ9HCJ6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 CROCCP3-202ENST00000420820 1947 ntBASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 KRT18P41-201ENST00000518924 1277 ntBASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VAT1LQ9HCJ6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 MYLKP1-201ENST00000509077 1580 ntBASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 UPK3BP1-201ENST00000428678 509 ntBASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 AC116407.4-201ENST00000623319 1061 ntBASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.37■■□□□ 1.01
VAT1LQ9HCJ6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 HLA-F-220ENST00000434407 884 ntBASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 AC112777.1-201ENST00000540175 1423 ntBASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
VAT1LQ9HCJ6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms