Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS25Q9BRG1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.9□□□□□ -0.35
VPS25Q9BRG1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
VPS25Q9BRG1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.9□□□□□ -0.35
VPS25Q9BRG1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VPS25Q9BRG1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.89□□□□□ -0.35
VPS25Q9BRG1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 AC004687.1-201ENST00000579003 1625 ntBASIC12.89□□□□□ -0.35
VPS25Q9BRG1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 AC087393.1-201ENST00000582896 145 ntBASIC12.89□□□□□ -0.35
VPS25Q9BRG1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.89□□□□□ -0.35
VPS25Q9BRG1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms