Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX3Q96PT4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX3Q96PT4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 KRT18P23-201ENST00000435622 1283 ntBASIC14.37□□□□□ -0.11
DUX3Q96PT4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 SEC1P-202ENST00000473944 940 ntBASIC14.37□□□□□ -0.11
DUX3Q96PT4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 AC034232.1-201ENST00000506026 1064 ntBASIC14.37□□□□□ -0.11
DUX3Q96PT4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.37□□□□□ -0.11
DUX3Q96PT4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 AL157888.1-201ENST00000631930 593 ntBASIC14.37□□□□□ -0.11
DUX3Q96PT4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 AL161938.1-201ENST00000569833 2180 ntBASIC14.37□□□□□ -0.11
DUX3Q96PT4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX3Q96PT4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DUX3Q96PT4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms