Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 AC106795.1-205ENST00000512851 1056 ntBASIC20.9■□□□□ 0.94
FGD4Q96M96 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.9■□□□□ 0.94
FGD4Q96M96 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.9■□□□□ 0.94
FGD4Q96M96 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.9■□□□□ 0.94
FGD4Q96M96 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.9■□□□□ 0.94
FGD4Q96M96 Z69720.1-201ENST00000601483 472 ntBASIC20.9■□□□□ 0.94
FGD4Q96M96 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.9■□□□□ 0.94
FGD4Q96M96 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
FGD4Q96M96 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
FGD4Q96M96 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.9■□□□□ 0.94
FGD4Q96M96 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FGD4Q96M96 AL163051.1-201ENST00000569214 1512 ntBASIC20.89■□□□□ 0.94
FGD4Q96M96 AL049812.1-201ENST00000432563 2267 ntBASIC20.89■□□□□ 0.94
FGD4Q96M96 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
FGD4Q96M96 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.89■□□□□ 0.94
FGD4Q96M96 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.89■□□□□ 0.93
FGD4Q96M96 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.89■□□□□ 0.93
FGD4Q96M96 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.89■□□□□ 0.93
FGD4Q96M96 AL353801.3-201ENST00000609898 542 ntBASIC20.89■□□□□ 0.93
FGD4Q96M96 AC004263.2-201ENST00000617183 678 ntBASIC20.89■□□□□ 0.93
FGD4Q96M96 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
FGD4Q96M96 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 AL161938.1-201ENST00000569833 2180 ntBASIC20.89■□□□□ 0.93
FGD4Q96M96 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FGD4Q96M96 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
FGD4Q96M96 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
FGD4Q96M96 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
FGD4Q96M96 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.88■□□□□ 0.93
FGD4Q96M96 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
FGD4Q96M96 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 MRPL3P1-201ENST00000400109 1033 ntBASIC20.88■□□□□ 0.93
FGD4Q96M96 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 GUSBP12-201ENST00000513727 720 ntBASIC20.88■□□□□ 0.93
FGD4Q96M96 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.88■□□□□ 0.93
FGD4Q96M96 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.88■□□□□ 0.93
FGD4Q96M96 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.88■□□□□ 0.93
FGD4Q96M96 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.88■□□□□ 0.93
FGD4Q96M96 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FGD4Q96M96 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.88■□□□□ 0.93
FGD4Q96M96 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.87■□□□□ 0.93
FGD4Q96M96 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FGD4Q96M96 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.87■□□□□ 0.93
FGD4Q96M96 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.87■□□□□ 0.93
FGD4Q96M96 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
FGD4Q96M96 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.87■□□□□ 0.93
FGD4Q96M96 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FGD4Q96M96 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.87■□□□□ 0.93
FGD4Q96M96 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FGD4Q96M96 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
FGD4Q96M96 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FGD4Q96M96 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FGD4Q96M96 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FGD4Q96M96 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FGD4Q96M96 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms