Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 AL359736.2-201ENST00000621992 437 ntBASIC20.84■□□□□ 0.93
SMARCE1Q969G3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 MESTP1-201ENST00000404287 994 ntBASIC20.83■□□□□ 0.93
SMARCE1Q969G3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 AP000692.2-201ENST00000608391 879 ntBASIC20.83■□□□□ 0.93
SMARCE1Q969G3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
SMARCE1Q969G3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 AL109659.2-201ENST00000606809 1674 ntBASIC20.83■□□□□ 0.92
SMARCE1Q969G3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCE1Q969G3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 AC008556.1-201ENST00000610908 2040 ntBASIC20.82■□□□□ 0.92
SMARCE1Q969G3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 MYLKP1-201ENST00000509077 1580 ntBASIC20.82■□□□□ 0.92
SMARCE1Q969G3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 FAM197Y1-201ENST00000421178 764 ntBASIC20.82■□□□□ 0.92
SMARCE1Q969G3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMARCE1Q969G3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.81■□□□□ 0.92
SMARCE1Q969G3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 AC008622.2-201ENST00000617006 1229 ntBASIC20.81■□□□□ 0.92
SMARCE1Q969G3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCE1Q969G3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms