Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC89Q8N998 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC89Q8N998 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC89Q8N998 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC89Q8N998 AC130371.2-201ENST00000619443 611 ntBASIC19.19■□□□□ 0.66
CCDC89Q8N998 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
CCDC89Q8N998 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC89Q8N998 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC89Q8N998 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC89Q8N998 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 AC008040.2-201ENST00000461049 708 ntBASIC19.18■□□□□ 0.66
CCDC89Q8N998 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC89Q8N998 MIR6786-201ENST00000616843 113 ntBASIC19.18■□□□□ 0.66
CCDC89Q8N998 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC89Q8N998 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 B3GAT3P1-201ENST00000471720 806 ntBASIC19.17■□□□□ 0.66
CCDC89Q8N998 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 AC093677.2-201ENST00000600169 1863 ntBASIC19.17■□□□□ 0.66
CCDC89Q8N998 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC89Q8N998 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC89Q8N998 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 AP000997.3-201ENST00000623333 2250 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms