Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RFX6Q8HWS3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.25■□□□□ 0.67
RFX6Q8HWS3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 MIR4674-201ENST00000582457 87 ntBASIC19.24■□□□□ 0.67
RFX6Q8HWS3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
RFX6Q8HWS3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 AL162741.1-201ENST00000565563 1558 ntBASIC19.23■□□□□ 0.67
RFX6Q8HWS3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX6Q8HWS3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.22■□□□□ 0.67
RFX6Q8HWS3 SNORA78-201ENST00000459373 127 ntBASIC19.22■□□□□ 0.67
RFX6Q8HWS3 KRT18P41-201ENST00000518924 1277 ntBASIC19.22■□□□□ 0.67
RFX6Q8HWS3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 MIR3180-5-201ENST00000583743 153 ntBASIC19.22■□□□□ 0.67
RFX6Q8HWS3 AP000525.1-201ENST00000608286 694 ntBASIC19.22■□□□□ 0.67
RFX6Q8HWS3 AP006294.2-201ENST00000641667 209 ntBASIC19.22■□□□□ 0.67
RFX6Q8HWS3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms