Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 AC010947.1-201ENST00000623454 693 ntBASIC20.28■□□□□ 0.84
COBLL1Q53SF7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COBLL1Q53SF7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 CYP2D8P-201ENST00000433633 1490 ntBASIC20.27■□□□□ 0.84
COBLL1Q53SF7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 INGX-201ENST00000359239 846 ntBASIC20.27■□□□□ 0.84
COBLL1Q53SF7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 TSPY15P-201ENST00000457163 923 ntBASIC20.27■□□□□ 0.84
COBLL1Q53SF7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 REXO1L9P-201ENST00000604264 2108 ntBASIC20.27■□□□□ 0.84
COBLL1Q53SF7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.27■□□□□ 0.84
COBLL1Q53SF7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COBLL1Q53SF7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COBLL1Q53SF7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 AIRN-201ENST00000601203 4374 ntBASIC20.26■□□□□ 0.83
COBLL1Q53SF7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 AC128688.1-201ENST00000487626 519 ntBASIC20.26■□□□□ 0.83
COBLL1Q53SF7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 AC093010.1-201ENST00000473625 1624 ntBASIC20.26■□□□□ 0.83
COBLL1Q53SF7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 KRT8P9-201ENST00000558927 1449 ntBASIC20.26■□□□□ 0.83
COBLL1Q53SF7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COBLL1Q53SF7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COBLL1Q53SF7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms