Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.71■□□□□ 0.59
KHDC1Q4VXA5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KHDC1Q4VXA5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
KHDC1Q4VXA5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
KHDC1Q4VXA5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KHDC1Q4VXA5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KHDC1Q4VXA5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KHDC1Q4VXA5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.71■□□□□ 0.58
KHDC1Q4VXA5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
KHDC1Q4VXA5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 AP003041.3-201ENST00000527151 707 ntBASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 AC093525.10-201ENST00000625130 1569 ntBASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 AC116562.4-202ENST00000641738 218 ntBASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
KHDC1Q4VXA5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 KRT8P3-201ENST00000519669 1449 ntBASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 CCR12P-201ENST00000446203 998 ntBASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 KRT18P22-201ENST00000402024 1347 ntBASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.69■□□□□ 0.58
KHDC1Q4VXA5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 TSPY17P-201ENST00000450329 467 ntBASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KHDC1Q4VXA5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KHDC1Q4VXA5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms