Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBXN1Q04323 AP000997.3-201ENST00000623333 2250 ntBASIC20.27■□□□□ 0.84
UBXN1Q04323 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBXN1Q04323 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.27■□□□□ 0.84
UBXN1Q04323 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBXN1Q04323 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBXN1Q04323 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
UBXN1Q04323 RARRES2P10-201ENST00000564312 460 ntBASIC20.27■□□□□ 0.84
UBXN1Q04323 MIR4651-201ENST00000582622 73 ntBASIC20.27■□□□□ 0.84
UBXN1Q04323 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.27■□□□□ 0.84
UBXN1Q04323 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.27■□□□□ 0.84
UBXN1Q04323 AC008622.2-201ENST00000617006 1229 ntBASIC20.27■□□□□ 0.84
UBXN1Q04323 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBXN1Q04323 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBXN1Q04323 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBXN1Q04323 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UBXN1Q04323 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UBXN1Q04323 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBXN1Q04323 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBXN1Q04323 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
UBXN1Q04323 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBXN1Q04323 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBXN1Q04323 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBXN1Q04323 LTB4R2-202ENST00000528054 3092 ntBASIC20.26■□□□□ 0.83
UBXN1Q04323 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.26■□□□□ 0.83
UBXN1Q04323 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
UBXN1Q04323 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBXN1Q04323 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.26■□□□□ 0.83
UBXN1Q04323 REXO1L9P-201ENST00000604264 2108 ntBASIC20.26■□□□□ 0.83
UBXN1Q04323 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.26■□□□□ 0.83
UBXN1Q04323 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
UBXN1Q04323 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBXN1Q04323 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
UBXN1Q04323 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
UBXN1Q04323 KRT18P41-201ENST00000518924 1277 ntBASIC20.26■□□□□ 0.83
UBXN1Q04323 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.26■□□□□ 0.83
UBXN1Q04323 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBXN1Q04323 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBXN1Q04323 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBXN1Q04323 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBXN1Q04323 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.26■□□□□ 0.83
UBXN1Q04323 AC138028.4-201ENST00000564984 1845 ntBASIC20.25■□□□□ 0.83
UBXN1Q04323 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.25■□□□□ 0.83
UBXN1Q04323 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.25■□□□□ 0.83
UBXN1Q04323 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.25■□□□□ 0.83
UBXN1Q04323 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBXN1Q04323 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
UBXN1Q04323 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.25■□□□□ 0.83
UBXN1Q04323 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.25■□□□□ 0.83
UBXN1Q04323 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.25■□□□□ 0.83
UBXN1Q04323 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.25■□□□□ 0.83
UBXN1Q04323 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.25■□□□□ 0.83
UBXN1Q04323 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.25■□□□□ 0.83
UBXN1Q04323 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.25■□□□□ 0.83
UBXN1Q04323 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBXN1Q04323 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBXN1Q04323 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.25■□□□□ 0.83
UBXN1Q04323 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.24■□□□□ 0.83
UBXN1Q04323 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.24■□□□□ 0.83
UBXN1Q04323 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.24■□□□□ 0.83
UBXN1Q04323 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.24■□□□□ 0.83
UBXN1Q04323 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UBXN1Q04323 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.24■□□□□ 0.83
UBXN1Q04323 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UBXN1Q04323 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.24■□□□□ 0.83
UBXN1Q04323 CD99P1-205ENST00000527459 561 ntBASIC20.24■□□□□ 0.83
UBXN1Q04323 AP000692.2-201ENST00000608391 879 ntBASIC20.24■□□□□ 0.83
UBXN1Q04323 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.24■□□□□ 0.83
UBXN1Q04323 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBXN1Q04323 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.24■□□□□ 0.83
UBXN1Q04323 FSCN1P1-201ENST00000568912 1481 ntBASIC20.24■□□□□ 0.83
UBXN1Q04323 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UBXN1Q04323 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBXN1Q04323 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.23■□□□□ 0.83
UBXN1Q04323 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UBXN1Q04323 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBXN1Q04323 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBXN1Q04323 MESTP1-201ENST00000404287 994 ntBASIC20.23■□□□□ 0.83
UBXN1Q04323 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBXN1Q04323 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms