Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2D3P61077 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 AC084018.2-201ENST00000613093 2607 ntBASIC13.17□□□□□ -0.3
UBE2D3P61077 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2D3P61077 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
UBE2D3P61077 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 KRT16P1-201ENST00000399124 1418 ntBASIC13.17□□□□□ -0.3
UBE2D3P61077 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2D3P61077 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2D3P61077 AC128676.1-201ENST00000454392 318 ntBASIC13.17□□□□□ -0.3
UBE2D3P61077 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2D3P61077 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2D3P61077 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UBE2D3P61077 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2D3P61077 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2D3P61077 MYC-208ENST00000641036 567 ntBASIC13.17□□□□□ -0.3
UBE2D3P61077 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2D3P61077 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2D3P61077 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UBE2D3P61077 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2D3P61077 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D3P61077 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D3P61077 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
UBE2D3P61077 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D3P61077 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBE2D3P61077 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBE2D3P61077 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
UBE2D3P61077 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
UBE2D3P61077 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.16□□□□□ -0.3
UBE2D3P61077 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D3P61077 C1QBPP2-201ENST00000528754 825 ntBASIC13.16□□□□□ -0.3
UBE2D3P61077 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D3P61077 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.16□□□□□ -0.3
UBE2D3P61077 AL031985.4-201ENST00000642138 673 ntBASIC13.16□□□□□ -0.3
UBE2D3P61077 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UBE2D3P61077 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBE2D3P61077 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D3P61077 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D3P61077 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D3P61077 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D3P61077 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBE2D3P61077 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2D3P61077 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D3P61077 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
UBE2D3P61077 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2D3P61077 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2D3P61077 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D3P61077 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms