Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.29■□□□□ 0.2
CCR9P51686 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.29■□□□□ 0.2
CCR9P51686 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CCR9P51686 AC091390.4-202ENST00000476426 537 ntBASIC16.29■□□□□ 0.2
CCR9P51686 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.29■□□□□ 0.2
CCR9P51686 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.29■□□□□ 0.2
CCR9P51686 AC233263.1-201ENST00000578059 224 ntBASIC16.29■□□□□ 0.2
CCR9P51686 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCR9P51686 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCR9P51686 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCR9P51686 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.29■□□□□ 0.2
CCR9P51686 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.29■□□□□ 0.2
CCR9P51686 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.29■□□□□ 0.2
CCR9P51686 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCR9P51686 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CCR9P51686 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 AC099398.1-201ENST00000567919 2776 ntBASIC16.28■□□□□ 0.2
CCR9P51686 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.28■□□□□ 0.2
CCR9P51686 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.28■□□□□ 0.2
CCR9P51686 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.28■□□□□ 0.2
CCR9P51686 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCR9P51686 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.28■□□□□ 0.2
CCR9P51686 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCR9P51686 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 AC004951.3-201ENST00000418645 1148 ntBASIC16.28■□□□□ 0.2
CCR9P51686 KSR1P1-201ENST00000446298 240 ntBASIC16.28■□□□□ 0.2
CCR9P51686 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.28■□□□□ 0.2
CCR9P51686 AC110285.5-201ENST00000611501 352 ntBASIC16.28■□□□□ 0.2
CCR9P51686 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 MYLKP1-201ENST00000509077 1580 ntBASIC16.28■□□□□ 0.2
CCR9P51686 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCR9P51686 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 RCC2P3-201ENST00000418112 1537 ntBASIC16.28■□□□□ 0.2
CCR9P51686 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 LINC00896-202ENST00000609602 2128 ntBASIC16.28■□□□□ 0.2
CCR9P51686 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
CCR9P51686 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.28■□□□□ 0.2
CCR9P51686 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 SIRPAP1-201ENST00000448467 1770 ntBASIC16.28■□□□□ 0.2
CCR9P51686 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCR9P51686 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.27■□□□□ 0.2
CCR9P51686 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.27■□□□□ 0.2
CCR9P51686 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR9P51686 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCR9P51686 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR9P51686 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR9P51686 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.27■□□□□ 0.2
CCR9P51686 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CCR9P51686 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCR9P51686 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.27■□□□□ 0.2
CCR9P51686 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR9P51686 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR9P51686 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCR9P51686 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.27■□□□□ 0.2
CCR9P51686 CKBP1-201ENST00000565489 1086 ntBASIC16.27■□□□□ 0.2
CCR9P51686 AC124016.1-201ENST00000609552 612 ntBASIC16.27■□□□□ 0.2
CCR9P51686 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.27■□□□□ 0.2
CCR9P51686 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCR9P51686 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCR9P51686 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR9P51686 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCR9P51686 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCR9P51686 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCR9P51686 AC009053.2-201ENST00000563701 2365 ntBASIC16.27■□□□□ 0.19
CCR9P51686 GNAS-203ENST00000306120 1878 ntBASIC16.27■□□□□ 0.19
CCR9P51686 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.27■□□□□ 0.19
CCR9P51686 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCR9P51686 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 AC138028.4-201ENST00000564984 1845 ntBASIC16.26■□□□□ 0.19
CCR9P51686 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CCR9P51686 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCR9P51686 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms