Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC211429.1-201ENST00000415277 523 ntBASIC18.64■□□□□ 0.57
CHRNA4P43681 ECEL1P3-201ENST00000427961 737 ntBASIC18.64■□□□□ 0.57
CHRNA4P43681 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRNA4P43681 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CHRNA4P43681 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CHRNA4P43681 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHRNA4P43681 AC112497.1-201ENST00000624824 639 ntBASIC18.64■□□□□ 0.57
CHRNA4P43681 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CHRNA4P43681 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 AC097493.4-201ENST00000641197 219 ntBASIC18.64■□□□□ 0.57
CHRNA4P43681 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNA4P43681 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHRNA4P43681 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CHRNA4P43681 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHRNA4P43681 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNA4P43681 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNA4P43681 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRNA4P43681 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA4P43681 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA4P43681 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA4P43681 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRNA4P43681 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA4P43681 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA4P43681 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA4P43681 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CHRNA4P43681 AC024243.1-201ENST00000609234 778 ntBASIC18.63■□□□□ 0.57
CHRNA4P43681 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA4P43681 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA4P43681 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA4P43681 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 ESPNP-201ENST00000270691 2015 ntBASIC18.62■□□□□ 0.57
CHRNA4P43681 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNA4P43681 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA4P43681 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA4P43681 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA4P43681 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CHRNA4P43681 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNA4P43681 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNA4P43681 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 AL138966.2-201ENST00000621997 464 ntBASIC18.62■□□□□ 0.57
CHRNA4P43681 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 AL163051.1-201ENST00000569214 1512 ntBASIC18.62■□□□□ 0.57
CHRNA4P43681 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
CHRNA4P43681 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNA4P43681 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA4P43681 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 AC135776.1-201ENST00000319817 2481 ntBASIC18.62■□□□□ 0.57
CHRNA4P43681 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA4P43681 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHRNA4P43681 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA4P43681 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA4P43681 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms