Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC1A3P43003 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 GPAT2P1-201ENST00000444924 1672 ntBASIC17.01■□□□□ 0.31
SLC1A3P43003 AC008556.1-201ENST00000610908 2040 ntBASIC17.01■□□□□ 0.31
SLC1A3P43003 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A3P43003 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A3P43003 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC1A3P43003 MCCD1P1-208ENST00000445732 328 ntBASIC17.01■□□□□ 0.31
SLC1A3P43003 TSPY17P-201ENST00000450329 467 ntBASIC17.01■□□□□ 0.31
SLC1A3P43003 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC1A3P43003 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC1A3P43003 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A3P43003 AL023803.3-201ENST00000615559 522 ntBASIC17.01■□□□□ 0.31
SLC1A3P43003 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC1A3P43003 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A3P43003 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC1A3P43003 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SLC1A3P43003 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SLC1A3P43003 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A3P43003 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SLC1A3P43003 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SLC1A3P43003 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17■□□□□ 0.31
SLC1A3P43003 MIR1238-201ENST00000408483 83 ntBASIC17■□□□□ 0.31
SLC1A3P43003 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A3P43003 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A3P43003 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17■□□□□ 0.31
SLC1A3P43003 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A3P43003 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A3P43003 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A3P43003 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A3P43003 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SLC1A3P43003 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 AC112777.1-201ENST00000540175 1423 ntBASIC16.99■□□□□ 0.31
SLC1A3P43003 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC1A3P43003 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SLC1A3P43003 AL390955.1-201ENST00000428694 934 ntBASIC16.99■□□□□ 0.31
SLC1A3P43003 CCR12P-201ENST00000446203 998 ntBASIC16.99■□□□□ 0.31
SLC1A3P43003 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A3P43003 C2orf69P3-201ENST00000565542 1120 ntBASIC16.99■□□□□ 0.31
SLC1A3P43003 AL353719.1-201ENST00000566847 864 ntBASIC16.99■□□□□ 0.31
SLC1A3P43003 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A3P43003 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A3P43003 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SLC1A3P43003 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC1A3P43003 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A3P43003 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
SLC1A3P43003 HCG11-201ENST00000411553 5696 ntBASIC16.98■□□□□ 0.31
SLC1A3P43003 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC1A3P43003 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A3P43003 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms