Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HADHAP40939 AC007613.1-201ENST00000572811 2597 ntBASIC18.71■□□□□ 0.59
HADHAP40939 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.71■□□□□ 0.59
HADHAP40939 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HADHAP40939 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HADHAP40939 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HADHAP40939 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.71■□□□□ 0.59
HADHAP40939 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
HADHAP40939 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.71■□□□□ 0.59
HADHAP40939 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.71■□□□□ 0.59
HADHAP40939 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.71■□□□□ 0.59
HADHAP40939 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.71■□□□□ 0.59
HADHAP40939 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.71■□□□□ 0.59
HADHAP40939 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 AC010653.2-201ENST00000623505 997 ntBASIC18.71■□□□□ 0.59
HADHAP40939 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HADHAP40939 AC112777.1-201ENST00000540175 1423 ntBASIC18.71■□□□□ 0.59
HADHAP40939 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
HADHAP40939 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HADHAP40939 AC126763.1-201ENST00000552015 2118 ntBASIC18.71■□□□□ 0.59
HADHAP40939 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.71■□□□□ 0.59
HADHAP40939 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHAP40939 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.7■□□□□ 0.58
HADHAP40939 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 AL357033.4-201ENST00000617703 1807 ntBASIC18.7■□□□□ 0.58
HADHAP40939 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
HADHAP40939 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.7■□□□□ 0.58
HADHAP40939 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.7■□□□□ 0.58
HADHAP40939 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.7■□□□□ 0.58
HADHAP40939 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.7■□□□□ 0.58
HADHAP40939 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HADHAP40939 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 AP003041.3-201ENST00000527151 707 ntBASIC18.7■□□□□ 0.58
HADHAP40939 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.7■□□□□ 0.58
HADHAP40939 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.7■□□□□ 0.58
HADHAP40939 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.7■□□□□ 0.58
HADHAP40939 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HADHAP40939 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HADHAP40939 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.7■□□□□ 0.58
HADHAP40939 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.7■□□□□ 0.58
HADHAP40939 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HADHAP40939 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHAP40939 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.7■□□□□ 0.58
HADHAP40939 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 AC008556.1-201ENST00000610908 2040 ntBASIC18.69■□□□□ 0.58
HADHAP40939 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
HADHAP40939 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.69■□□□□ 0.58
HADHAP40939 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.69■□□□□ 0.58
HADHAP40939 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.69■□□□□ 0.58
HADHAP40939 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.69■□□□□ 0.58
HADHAP40939 AC007663.1-201ENST00000438948 1240 ntBASIC18.69■□□□□ 0.58
HADHAP40939 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.69■□□□□ 0.58
HADHAP40939 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
HADHAP40939 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HADHAP40939 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HADHAP40939 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
HADHAP40939 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.69■□□□□ 0.58
HADHAP40939 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HADHAP40939 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
HADHAP40939 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HADHAP40939 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HADHAP40939 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HADHAP40939 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
HADHAP40939 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HADHAP40939 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms