Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.4■□□□□ 0.54
HMGCLP35914 HOMER2P1-201ENST00000455653 964 ntBASIC18.4■□□□□ 0.54
HMGCLP35914 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCLP35914 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCLP35914 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGCLP35914 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
HMGCLP35914 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
HMGCLP35914 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCLP35914 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HMGCLP35914 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCLP35914 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCLP35914 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HMGCLP35914 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCLP35914 RASA4DP-201ENST00000460726 1199 ntBASIC18.39■□□□□ 0.53
HMGCLP35914 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
HMGCLP35914 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HMGCLP35914 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HMGCLP35914 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.39■□□□□ 0.53
HMGCLP35914 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HMGCLP35914 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMGCLP35914 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLP35914 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
HMGCLP35914 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCLP35914 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
HMGCLP35914 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMGCLP35914 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCLP35914 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCLP35914 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 AC063952.2-201ENST00000498792 1227 ntBASIC18.38■□□□□ 0.53
HMGCLP35914 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCLP35914 AL157888.1-201ENST00000631930 593 ntBASIC18.38■□□□□ 0.53
HMGCLP35914 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCLP35914 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLP35914 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMGCLP35914 AC099343.3-201ENST00000605834 2503 ntBASIC18.38■□□□□ 0.53
HMGCLP35914 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLP35914 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMGCLP35914 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 PVRIG2P-201ENST00000435460 978 ntBASIC18.37■□□□□ 0.53
HMGCLP35914 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCLP35914 DUX4L26-201ENST00000489078 1255 ntBASIC18.37■□□□□ 0.53
HMGCLP35914 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGCLP35914 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCLP35914 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.37■□□□□ 0.53
HMGCLP35914 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCLP35914 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCLP35914 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMGCLP35914 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLP35914 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLP35914 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLP35914 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms