Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATF1P18846 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.24■□□□□ 0.19
ATF1P18846 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATF1P18846 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.24■□□□□ 0.19
ATF1P18846 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATF1P18846 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ATF1P18846 POU5F1P3-201ENST00000428824 1078 ntBASIC16.24■□□□□ 0.19
ATF1P18846 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.24■□□□□ 0.19
ATF1P18846 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.24■□□□□ 0.19
ATF1P18846 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
ATF1P18846 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.24■□□□□ 0.19
ATF1P18846 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 PCDHA12-202ENST00000613593 2588 ntBASIC16.24■□□□□ 0.19
ATF1P18846 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATF1P18846 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATF1P18846 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.23■□□□□ 0.19
ATF1P18846 AC012317.2-201ENST00000623305 2251 ntBASIC16.23■□□□□ 0.19
ATF1P18846 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.23■□□□□ 0.19
ATF1P18846 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.23■□□□□ 0.19
ATF1P18846 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.23■□□□□ 0.19
ATF1P18846 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.23■□□□□ 0.19
ATF1P18846 AC124016.1-201ENST00000609552 612 ntBASIC16.23■□□□□ 0.19
ATF1P18846 AC110285.5-201ENST00000611501 352 ntBASIC16.23■□□□□ 0.19
ATF1P18846 AL445675.2-201ENST00000620291 557 ntBASIC16.23■□□□□ 0.19
ATF1P18846 AC131212.4-201ENST00000623606 975 ntBASIC16.23■□□□□ 0.19
ATF1P18846 AC068587.9-201ENST00000641814 219 ntBASIC16.23■□□□□ 0.19
ATF1P18846 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATF1P18846 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATF1P18846 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
ATF1P18846 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATF1P18846 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.23■□□□□ 0.19
ATF1P18846 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ATF1P18846 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.22■□□□□ 0.19
ATF1P18846 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ATF1P18846 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ATF1P18846 ESRRAP1-201ENST00000400596 1257 ntBASIC16.22■□□□□ 0.19
ATF1P18846 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 AC133681.1-201ENST00000465482 601 ntBASIC16.22■□□□□ 0.19
ATF1P18846 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 KRT18P6-201ENST00000555540 1265 ntBASIC16.22■□□□□ 0.19
ATF1P18846 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms