Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KLHL41O60662 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 FAM197Y1-201ENST00000421178 764 ntBASIC18.37■□□□□ 0.53
KLHL41O60662 TUBB8P6-201ENST00000436895 1288 ntBASIC18.37■□□□□ 0.53
KLHL41O60662 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.37■□□□□ 0.53
KLHL41O60662 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.37■□□□□ 0.53
KLHL41O60662 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL41O60662 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL41O60662 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL41O60662 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.37■□□□□ 0.53
KLHL41O60662 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KLHL41O60662 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.37■□□□□ 0.53
KLHL41O60662 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.37■□□□□ 0.53
KLHL41O60662 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KLHL41O60662 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
KLHL41O60662 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KLHL41O60662 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.36■□□□□ 0.53
KLHL41O60662 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.36■□□□□ 0.53
KLHL41O60662 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.36■□□□□ 0.53
KLHL41O60662 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.36■□□□□ 0.53
KLHL41O60662 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KLHL41O60662 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.36■□□□□ 0.53
KLHL41O60662 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.36■□□□□ 0.53
KLHL41O60662 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.36■□□□□ 0.53
KLHL41O60662 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
KLHL41O60662 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL41O60662 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL41O60662 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.35■□□□□ 0.53
KLHL41O60662 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL41O60662 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.35■□□□□ 0.53
KLHL41O60662 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL41O60662 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL41O60662 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
KLHL41O60662 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KLHL41O60662 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL41O60662 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
KLHL41O60662 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KLHL41O60662 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KLHL41O60662 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KLHL41O60662 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.34■□□□□ 0.53
KLHL41O60662 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
KLHL41O60662 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.34■□□□□ 0.53
KLHL41O60662 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.34■□□□□ 0.53
KLHL41O60662 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KLHL41O60662 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
KLHL41O60662 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL41O60662 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms