Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPEO14579 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.52■□□□□ 0.55
COPEO14579 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.52■□□□□ 0.55
COPEO14579 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPEO14579 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPEO14579 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COPEO14579 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
COPEO14579 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.52■□□□□ 0.55
COPEO14579 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPEO14579 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COPEO14579 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPEO14579 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
COPEO14579 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.51■□□□□ 0.55
COPEO14579 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.51■□□□□ 0.55
COPEO14579 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.51■□□□□ 0.55
COPEO14579 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.51■□□□□ 0.55
COPEO14579 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.51■□□□□ 0.55
COPEO14579 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.51■□□□□ 0.55
COPEO14579 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPEO14579 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COPEO14579 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
COPEO14579 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.5■□□□□ 0.55
COPEO14579 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COPEO14579 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
COPEO14579 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
COPEO14579 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
COPEO14579 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
COPEO14579 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.5■□□□□ 0.55
COPEO14579 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
COPEO14579 UNC93B5-201ENST00000530315 699 ntBASIC18.5■□□□□ 0.55
COPEO14579 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.5■□□□□ 0.55
COPEO14579 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.5■□□□□ 0.55
COPEO14579 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.5■□□□□ 0.55
COPEO14579 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.5■□□□□ 0.55
COPEO14579 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.5■□□□□ 0.55
COPEO14579 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 MYLKP1-201ENST00000509077 1580 ntBASIC18.5■□□□□ 0.55
COPEO14579 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
COPEO14579 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPEO14579 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.49■□□□□ 0.55
COPEO14579 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.49■□□□□ 0.55
COPEO14579 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.49■□□□□ 0.55
COPEO14579 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.49■□□□□ 0.55
COPEO14579 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.49■□□□□ 0.55
COPEO14579 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COPEO14579 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.49■□□□□ 0.55
COPEO14579 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.49■□□□□ 0.55
COPEO14579 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COPEO14579 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPEO14579 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.49■□□□□ 0.55
COPEO14579 RCC2P3-201ENST00000418112 1537 ntBASIC18.49■□□□□ 0.55
COPEO14579 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COPEO14579 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COPEO14579 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.48■□□□□ 0.55
COPEO14579 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms