Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 AC096733.2-201ENST00000609937 1394 ntBASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV4A0A0C4DH28 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 KRT8P32-201ENST00000512863 1461 ntBASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV4A0A0C4DH28 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 SNORA78-201ENST00000459373 127 ntBASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 AC068587.9-201ENST00000641814 219 ntBASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV4A0A0C4DH28 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV4A0A0C4DH28 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV4A0A0C4DH28 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV4A0A0C4DH28 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV4A0A0C4DH28 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV4A0A0C4DH28 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV4A0A0C4DH28 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms