Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 HEIH-201ENST00000623091 1652 ntBASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 KRT8P32-201ENST00000512863 1461 ntBASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DRB4X5D2U9 PRORSD1P-202ENST00000563365 2154 ntBASIC13.96□□□□□ -0.18
HLA-DRB4X5D2U9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DRB4X5D2U9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DRB4X5D2U9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DRB4X5D2U9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DRB4X5D2U9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DRB4X5D2U9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 AC009113.1-201ENST00000570267 2443 ntBASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DRB4X5D2U9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 AL031598.1-201ENST00000561511 1773 ntBASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 AL355075.4-201ENST00000554988 638 ntBASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 FITM1-202ENST00000559294 800 ntBASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 AP000525.1-201ENST00000608286 694 ntBASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 AC068587.9-201ENST00000641814 219 ntBASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DRB4X5D2U9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms