Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 FSCN1P1-201ENST00000568912 1481 ntBASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 AL049597.2-201ENST00000565575 961 ntBASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX49Q9Y6V7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 AC104076.2-201ENST00000448912 469 ntBASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 AC097488.1-201ENST00000507834 756 ntBASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 HTR7P1-202ENST00000624664 4411 ntBASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 RCC2P6-201ENST00000526625 1557 ntBASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
DDX49Q9Y6V7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DDX49Q9Y6V7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
DDX49Q9Y6V7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
DDX49Q9Y6V7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 ARMC10P1-201ENST00000313754 855 ntBASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 KRT18P22-201ENST00000402024 1347 ntBASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX49Q9Y6V7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms