Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 AC036111.1-201ENST00000533973 1582 ntBASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 AL390955.1-201ENST00000428694 934 ntBASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 TSPY17P-201ENST00000450329 467 ntBASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 SNORA78-201ENST00000459373 127 ntBASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 AP003041.3-201ENST00000527151 707 ntBASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 AL353719.1-201ENST00000566847 864 ntBASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CYP46A1Q9Y6A2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.95■■□□□ 1.11
CYP46A1Q9Y6A2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 KRT17P2-201ENST00000300992 1314 ntBASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CYP46A1Q9Y6A2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 AC093677.2-201ENST00000600169 1863 ntBASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 MIR1238-201ENST00000408483 83 ntBASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 AL355075.4-201ENST00000554988 638 ntBASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 ESPNP-201ENST00000270691 2015 ntBASIC21.94■■□□□ 1.1
CYP46A1Q9Y6A2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.93■■□□□ 1.1
CYP46A1Q9Y6A2 CCR12P-201ENST00000446203 998 ntBASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms