Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 AC066615.1-201ENST00000640911 628 ntBASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 AL049637.2-201ENST00000641778 930 ntBASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 KRT16P1-201ENST00000399124 1418 ntBASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.41■□□□□ 0.06
LIN7CQ9NUP9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 AC093827.2-201ENST00000512654 315 ntBASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 Z99916.2-201ENST00000604037 246 ntBASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 AC131212.4-201ENST00000623606 975 ntBASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 RCC2P6-201ENST00000526625 1557 ntBASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 PCDHB18P-201ENST00000524813 2368 ntBASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 AC068880.1-201ENST00000507289 2297 ntBASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.4■□□□□ 0.06
LIN7CQ9NUP9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LIN7CQ9NUP9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms