Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 AC009102.3-201ENST00000623118 1491 ntBASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ECHDC1Q9NTX5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 RNF152P1-201ENST00000397754 604 ntBASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 AK4P3-201ENST00000418260 669 ntBASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 TSPY5P-201ENST00000426936 936 ntBASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 AL157888.1-201ENST00000631930 593 ntBASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
ECHDC1Q9NTX5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 FAM210CP-201ENST00000445714 574 ntBASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 AC009065.1-201ENST00000564055 1225 ntBASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
ECHDC1Q9NTX5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
ECHDC1Q9NTX5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.51■■□□□ 1.19
ECHDC1Q9NTX5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms