Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPAP3Q9H6T3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPAP3Q9H6T3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP3Q9H6T3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP3Q9H6T3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.28■■□□□ 1
RPAP3Q9H6T3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RPAP3Q9H6T3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.28■■□□□ 1
RPAP3Q9H6T3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP3Q9H6T3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.28■■□□□ 1
RPAP3Q9H6T3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.28■■□□□ 1
RPAP3Q9H6T3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP3Q9H6T3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RPAP3Q9H6T3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RPAP3Q9H6T3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP3Q9H6T3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP3Q9H6T3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.28■■□□□ 1
RPAP3Q9H6T3 AC099343.3-201ENST00000605834 2503 ntBASIC21.27■■□□□ 1
RPAP3Q9H6T3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
RPAP3Q9H6T3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.27■■□□□ 1
RPAP3Q9H6T3 NUS1P2-201ENST00000417358 873 ntBASIC21.27■■□□□ 1
RPAP3Q9H6T3 AP002469.2-201ENST00000531724 424 ntBASIC21.27■■□□□ 1
RPAP3Q9H6T3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.27■■□□□ 1
RPAP3Q9H6T3 AC011840.4-201ENST00000578471 627 ntBASIC21.27■■□□□ 1
RPAP3Q9H6T3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RPAP3Q9H6T3 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.27■■□□□ 1
RPAP3Q9H6T3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.27■■□□□ 1
RPAP3Q9H6T3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPAP3Q9H6T3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RPAP3Q9H6T3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPAP3Q9H6T3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 AKR1C7P-201ENST00000305623 895 ntBASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP3Q9H6T3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 AC073130.3-201ENST00000624389 2278 ntBASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 MIR149-201ENST00000384879 89 ntBASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 MINOS1P3-201ENST00000457048 203 ntBASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 AL121912.1-201ENST00000603683 238 ntBASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP3Q9H6T3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 SLC25A6P4-201ENST00000586535 553 ntBASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms