Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 AL499627.1-201ENST00000569373 2188 ntBASIC19.16■□□□□ 0.66
RNF38Q9H0F5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 AL121894.2-201ENST00000602977 491 ntBASIC19.15■□□□□ 0.66
RNF38Q9H0F5 AC024563.2-201ENST00000603282 481 ntBASIC19.15■□□□□ 0.66
RNF38Q9H0F5 AL390719.2-201ENST00000606993 987 ntBASIC19.15■□□□□ 0.66
RNF38Q9H0F5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF38Q9H0F5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF38Q9H0F5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RNF38Q9H0F5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
RNF38Q9H0F5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF38Q9H0F5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 AL450487.1-201ENST00000426799 995 ntBASIC19.13■□□□□ 0.65
RNF38Q9H0F5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 AC009065.1-201ENST00000564055 1225 ntBASIC19.13■□□□□ 0.65
RNF38Q9H0F5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 KRT18P1-202ENST00000452408 1331 ntBASIC19.13■□□□□ 0.65
RNF38Q9H0F5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF38Q9H0F5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms