Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-2Q9C056 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NKX6-2Q9C056 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-2Q9C056 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.02■□□□□ -0
NKX6-2Q9C056 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
NKX6-2Q9C056 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.02■□□□□ -0
NKX6-2Q9C056 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-2Q9C056 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.02■□□□□ -0
NKX6-2Q9C056 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-2Q9C056 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NKX6-2Q9C056 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NKX6-2Q9C056 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NKX6-2Q9C056 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-2Q9C056 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15□□□□□ -0.01
NKX6-2Q9C056 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-2Q9C056 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 NME4-202ENST00000382940 766 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-2Q9C056 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15□□□□□ -0.01
NKX6-2Q9C056 PBX2P1-201ENST00000493219 1291 ntBASIC15□□□□□ -0.01
NKX6-2Q9C056 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15□□□□□ -0.01
NKX6-2Q9C056 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-2Q9C056 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-2Q9C056 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15□□□□□ -0.01
NKX6-2Q9C056 AC106739.1-201ENST00000617035 715 ntBASIC15□□□□□ -0.01
NKX6-2Q9C056 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-2Q9C056 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-2Q9C056 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-2Q9C056 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-2Q9C056 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-2Q9C056 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-2Q9C056 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
NKX6-2Q9C056 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-2Q9C056 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms