Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 C1QBPP2-201ENST00000528754 825 ntBASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 AC124016.1-201ENST00000609552 612 ntBASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 MYC-208ENST00000641036 567 ntBASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 AC068587.9-201ENST00000641814 219 ntBASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THUMPD3Q9BV44 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 KRT18P29-201ENST00000397031 1267 ntBASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.71■□□□□ 0.43
THUMPD3Q9BV44 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
THUMPD3Q9BV44 AC135776.1-201ENST00000319817 2481 ntBASIC17.71■□□□□ 0.42
THUMPD3Q9BV44 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
THUMPD3Q9BV44 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 AC133681.1-201ENST00000465482 601 ntBASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 AC110285.5-201ENST00000611501 352 ntBASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 ITM2C-210ENST00000620962 501 ntBASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
THUMPD3Q9BV44 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.69■□□□□ 0.42
THUMPD3Q9BV44 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms