Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TMEM191A-211ENST00000637163 1067 ntBASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 AC233263.1-201ENST00000578059 224 ntBASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 AL353708.3-201ENST00000610272 989 ntBASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4Y2Q8TD47 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RPS4Y2Q8TD47 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RPS4Y2Q8TD47 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RPS4Y2Q8TD47 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.21■□□□□ 0.18
RPS4Y2Q8TD47 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RPS4Y2Q8TD47 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 AL096828.2-201ENST00000567259 1965 ntBASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 PRORSD1P-202ENST00000563365 2154 ntBASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 ITM2C-210ENST00000620962 501 ntBASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RPS4Y2Q8TD47 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms