Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 KRT17P2-201ENST00000300992 1314 ntBASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 SNORA78-201ENST00000459373 127 ntBASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 MIR4497-201ENST00000583208 89 ntBASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 KRT8P3-201ENST00000519669 1449 ntBASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCHCR1Q8TD31 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 AC068880.1-201ENST00000507289 2297 ntBASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCHCR1Q8TD31 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 TSPY7P-201ENST00000431358 1114 ntBASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 NUDT16P1-203ENST00000513809 620 ntBASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 AC026471.5-201ENST00000615068 467 ntBASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCHCR1Q8TD31 FSCN1P1-201ENST00000568912 1481 ntBASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms