Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 PCDHA3-202ENST00000532566 4594 ntBASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 SPCS2P3-201ENST00000500401 656 ntBASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 LINC02228-204ENST00000642115 2962 ntBASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 UBALD1-205ENST00000590891 2641 ntBASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SPTSSBQ8NFR3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 AC093484.2-201ENST00000580996 2166 ntBASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 AC080080.1-201ENST00000625121 2420 ntBASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC10.16□□□□□ -0.78
SPTSSBQ8NFR3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms