Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 AL596275.1-201ENST00000423464 877 ntBASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 AL353719.1-201ENST00000566847 864 ntBASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 AC036111.1-201ENST00000533973 1582 ntBASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 KRT8P9-201ENST00000558927 1449 ntBASIC18.32■□□□□ 0.52
CPNE9Q8IYJ1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 MIR3180-5-201ENST00000583743 153 ntBASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 AC066615.1-201ENST00000640911 628 ntBASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE9Q8IYJ1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 AC135050.7-201ENST00000624508 2218 ntBASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 CCR12P-201ENST00000446203 998 ntBASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 TSPY17P-201ENST00000450329 467 ntBASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 C2orf69P3-201ENST00000565542 1120 ntBASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 AC092338.2-201ENST00000568827 1415 ntBASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE9Q8IYJ1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms