Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 NEFHP1-201ENST00000412845 2629 ntBASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 RNF165-205ENST00000588679 2904 ntBASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC24.51■■□□□ 1.51
CCDC146Q8IYE0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 TSPY5P-201ENST00000426936 936 ntBASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CCDC146Q8IYE0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 RNF152P1-201ENST00000397754 604 ntBASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 AP000523.1-201ENST00000398242 1049 ntBASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 AL163051.1-201ENST00000569214 1512 ntBASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC146Q8IYE0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC146Q8IYE0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms