Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 AF186192.3-201ENST00000583427 947 ntBASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC50Q8IVM0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 FAM207BP-201ENST00000447172 505 ntBASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 AC026271.3-201ENST00000571884 352 ntBASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC50Q8IVM0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 FAM201B-201ENST00000458407 597 ntBASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 RARRES2P10-201ENST00000564312 460 ntBASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 AC073195.1-201ENST00000607241 877 ntBASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC50Q8IVM0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms