Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 LIN28AP1-201ENST00000429574 405 ntBASIC17.36■□□□□ 0.37
CCDC71Q8IV32 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC71Q8IV32 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 ATP5G1P1-201ENST00000448724 379 ntBASIC17.35■□□□□ 0.37
CCDC71Q8IV32 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 DUX4L26-201ENST00000489078 1255 ntBASIC17.35■□□□□ 0.37
CCDC71Q8IV32 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 SLC25A1P4-201ENST00000567977 778 ntBASIC17.35■□□□□ 0.37
CCDC71Q8IV32 NTF6B-201ENST00000591913 560 ntBASIC17.35■□□□□ 0.37
CCDC71Q8IV32 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC71Q8IV32 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 AP005242.2-201ENST00000580065 1175 ntBASIC17.34■□□□□ 0.37
CCDC71Q8IV32 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC71Q8IV32 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms