Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 FLJ13224-201ENST00000313737 1514 ntBASIC20.32■□□□□ 0.84
COBLL1Q53SF7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COBLL1Q53SF7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 PHGDH-209ENST00000641074 1780 ntBASIC20.31■□□□□ 0.84
COBLL1Q53SF7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COBLL1Q53SF7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.3■□□□□ 0.84
COBLL1Q53SF7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 AL096828.2-201ENST00000567259 1965 ntBASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 AC009065.1-201ENST00000564055 1225 ntBASIC20.29■□□□□ 0.84
COBLL1Q53SF7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COBLL1Q53SF7 AC112497.1-201ENST00000624824 639 ntBASIC20.29■□□□□ 0.84
COBLL1Q53SF7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms