Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.07■□□□□ 0.96
TM4SF4P48230 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.07■□□□□ 0.96
TM4SF4P48230 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TM4SF4P48230 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
TM4SF4P48230 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.07■□□□□ 0.96
TM4SF4P48230 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.07■□□□□ 0.96
TM4SF4P48230 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.07■□□□□ 0.96
TM4SF4P48230 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TM4SF4P48230 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TM4SF4P48230 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.06■□□□□ 0.96
TM4SF4P48230 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.06■□□□□ 0.96
TM4SF4P48230 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TM4SF4P48230 AC254562.1-201ENST00000417586 456 ntBASIC21.06■□□□□ 0.96
TM4SF4P48230 AL645939.2-201ENST00000427340 991 ntBASIC21.06■□□□□ 0.96
TM4SF4P48230 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.06■□□□□ 0.96
TM4SF4P48230 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
TM4SF4P48230 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.06■□□□□ 0.96
TM4SF4P48230 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.06■□□□□ 0.96
TM4SF4P48230 SNHG9-202ENST00000564014 471 ntBASIC21.06■□□□□ 0.96
TM4SF4P48230 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.06■□□□□ 0.96
TM4SF4P48230 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.06■□□□□ 0.96
TM4SF4P48230 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.06■□□□□ 0.96
TM4SF4P48230 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.06■□□□□ 0.96
TM4SF4P48230 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.06■□□□□ 0.96
TM4SF4P48230 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.06■□□□□ 0.96
TM4SF4P48230 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF4P48230 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF4P48230 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF4P48230 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TM4SF4P48230 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.05■□□□□ 0.96
TM4SF4P48230 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TM4SF4P48230 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF4P48230 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.05■□□□□ 0.96
TM4SF4P48230 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF4P48230 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF4P48230 AC009154.2-201ENST00000621177 724 ntBASIC21.05■□□□□ 0.96
TM4SF4P48230 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.05■□□□□ 0.96
TM4SF4P48230 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF4P48230 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF4P48230 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF4P48230 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
TM4SF4P48230 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF4P48230 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TM4SF4P48230 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TM4SF4P48230 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.04■□□□□ 0.96
TM4SF4P48230 LAGE3P1-201ENST00000425356 484 ntBASIC21.04■□□□□ 0.96
TM4SF4P48230 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.04■□□□□ 0.96
TM4SF4P48230 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.04■□□□□ 0.96
TM4SF4P48230 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.04■□□□□ 0.96
TM4SF4P48230 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.04■□□□□ 0.96
TM4SF4P48230 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.04■□□□□ 0.96
TM4SF4P48230 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 IRX1P1-201ENST00000438849 1838 ntBASIC21.04■□□□□ 0.96
TM4SF4P48230 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF4P48230 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TM4SF4P48230 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 LINC00565-201ENST00000562710 2331 ntBASIC21.03■□□□□ 0.96
TM4SF4P48230 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TM4SF4P48230 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF4P48230 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms