Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MMP2P08253 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.64■□□□□ 0.58
MMP2P08253 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.64■□□□□ 0.58
MMP2P08253 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP2P08253 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP2P08253 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP2P08253 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.64■□□□□ 0.57
MMP2P08253 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 YBX1P2-201ENST00000489612 999 ntBASIC18.64■□□□□ 0.57
MMP2P08253 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP2P08253 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP2P08253 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP2P08253 MIR3917-201ENST00000580971 93 ntBASIC18.64■□□□□ 0.57
MMP2P08253 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MMP2P08253 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP2P08253 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 AC009102.3-201ENST00000623118 1491 ntBASIC18.64■□□□□ 0.57
MMP2P08253 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MMP2P08253 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
MMP2P08253 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MMP2P08253 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP2P08253 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP2P08253 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP2P08253 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP2P08253 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 ESPNP-201ENST00000270691 2015 ntBASIC18.63■□□□□ 0.57
MMP2P08253 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 AC104076.2-201ENST00000448912 469 ntBASIC18.63■□□□□ 0.57
MMP2P08253 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP2P08253 RN7SL850P-201ENST00000579959 291 ntBASIC18.63■□□□□ 0.57
MMP2P08253 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP2P08253 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP2P08253 AL157888.1-201ENST00000631930 593 ntBASIC18.63■□□□□ 0.57
MMP2P08253 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP2P08253 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MMP2P08253 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MMP2P08253 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP2P08253 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP2P08253 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MMP2P08253 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP2P08253 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP2P08253 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP2P08253 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.62■□□□□ 0.57
MMP2P08253 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.62■□□□□ 0.57
MMP2P08253 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP2P08253 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
MMP2P08253 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP2P08253 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MMP2P08253 RNF165-205ENST00000588679 2904 ntBASIC18.62■□□□□ 0.57
MMP2P08253 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP2P08253 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP2P08253 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP2P08253 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP2P08253 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP2P08253 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MMP2P08253 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP2P08253 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP2P08253 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP2P08253 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP2P08253 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP2P08253 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MMP2P08253 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP2P08253 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.61■□□□□ 0.57
MMP2P08253 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP2P08253 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MMP2P08253 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP2P08253 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MMP2P08253 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms