Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.94□□□□□ -0.18
HLA-DQA1P01909 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 NTF6G-201ENST00000591094 616 ntBASIC13.94□□□□□ -0.18
HLA-DQA1P01909 MIR5787-201ENST00000611784 55 ntBASIC13.94□□□□□ -0.18
HLA-DQA1P01909 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 FLJ13224-201ENST00000313737 1514 ntBASIC13.94□□□□□ -0.18
HLA-DQA1P01909 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DQA1P01909 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 AC093677.2-201ENST00000600169 1863 ntBASIC13.93□□□□□ -0.18
HLA-DQA1P01909 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 MIR935-201ENST00000401179 91 ntBASIC13.93□□□□□ -0.18
HLA-DQA1P01909 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SLC7A5P1-201ENST00000568957 537 ntBASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 AC022211.2-201ENST00000585075 2527 ntBASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA1P01909 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLA-DQA1P01909 AC023632.3-201ENST00000521633 145 ntBASIC13.92□□□□□ -0.18
HLA-DQA1P01909 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms