Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CLSTN1O94985 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CLSTN1O94985 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.5■□□□□ 0.87
CLSTN1O94985 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CLSTN1O94985 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLSTN1O94985 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.49■□□□□ 0.87
CLSTN1O94985 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.49■□□□□ 0.87
CLSTN1O94985 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.49■□□□□ 0.87
CLSTN1O94985 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.49■□□□□ 0.87
CLSTN1O94985 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.49■□□□□ 0.87
CLSTN1O94985 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLSTN1O94985 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.48■□□□□ 0.87
CLSTN1O94985 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.48■□□□□ 0.87
CLSTN1O94985 FP475955.4-201ENST00000623131 1990 ntBASIC20.48■□□□□ 0.87
CLSTN1O94985 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLSTN1O94985 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.48■□□□□ 0.87
CLSTN1O94985 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLSTN1O94985 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLSTN1O94985 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CLSTN1O94985 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.48■□□□□ 0.87
CLSTN1O94985 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CLSTN1O94985 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.48■□□□□ 0.87
CLSTN1O94985 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.48■□□□□ 0.87
CLSTN1O94985 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.48■□□□□ 0.87
CLSTN1O94985 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.48■□□□□ 0.87
CLSTN1O94985 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.48■□□□□ 0.87
CLSTN1O94985 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CLSTN1O94985 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.48■□□□□ 0.87
CLSTN1O94985 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLSTN1O94985 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CLSTN1O94985 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.47■□□□□ 0.87
CLSTN1O94985 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.47■□□□□ 0.87
CLSTN1O94985 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.47■□□□□ 0.87
CLSTN1O94985 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.47■□□□□ 0.87
CLSTN1O94985 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.47■□□□□ 0.87
CLSTN1O94985 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.47■□□□□ 0.87
CLSTN1O94985 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.47■□□□□ 0.87
CLSTN1O94985 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.47■□□□□ 0.87
CLSTN1O94985 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CLSTN1O94985 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.47■□□□□ 0.87
CLSTN1O94985 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLSTN1O94985 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.47■□□□□ 0.87
CLSTN1O94985 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms