Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.61■□□□□ 0.57
RFPL1O75677 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.61■□□□□ 0.57
RFPL1O75677 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFPL1O75677 PRSS44-201ENST00000515154 1146 ntBASIC18.61■□□□□ 0.57
RFPL1O75677 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.61■□□□□ 0.57
RFPL1O75677 AL445675.2-201ENST00000620291 557 ntBASIC18.61■□□□□ 0.57
RFPL1O75677 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
RFPL1O75677 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
RFPL1O75677 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFPL1O75677 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.6■□□□□ 0.57
RFPL1O75677 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFPL1O75677 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RFPL1O75677 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.6■□□□□ 0.57
RFPL1O75677 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RFPL1O75677 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
RFPL1O75677 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.6■□□□□ 0.57
RFPL1O75677 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RFPL1O75677 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RFPL1O75677 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.6■□□□□ 0.57
RFPL1O75677 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.6■□□□□ 0.57
RFPL1O75677 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
RFPL1O75677 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL1O75677 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RFPL1O75677 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RFPL1O75677 AC008556.1-201ENST00000610908 2040 ntBASIC18.59■□□□□ 0.57
RFPL1O75677 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RFPL1O75677 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RFPL1O75677 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 FAM197Y1-201ENST00000421178 764 ntBASIC18.59■□□□□ 0.57
RFPL1O75677 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.59■□□□□ 0.57
RFPL1O75677 AC004980.1-204ENST00000429707 299 ntBASIC18.59■□□□□ 0.57
RFPL1O75677 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RFPL1O75677 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.59■□□□□ 0.57
RFPL1O75677 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.59■□□□□ 0.57
RFPL1O75677 AC073195.1-201ENST00000607241 877 ntBASIC18.59■□□□□ 0.57
RFPL1O75677 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.59■□□□□ 0.57
RFPL1O75677 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.59■□□□□ 0.57
RFPL1O75677 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFPL1O75677 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.58■□□□□ 0.57
RFPL1O75677 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.58■□□□□ 0.57
RFPL1O75677 AC020916.1-201ENST00000587762 1774 ntBASIC18.58■□□□□ 0.57
RFPL1O75677 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.58■□□□□ 0.57
RFPL1O75677 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFPL1O75677 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.58■□□□□ 0.57
RFPL1O75677 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.58■□□□□ 0.57
RFPL1O75677 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFPL1O75677 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.58■□□□□ 0.57
RFPL1O75677 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFPL1O75677 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.58■□□□□ 0.56
RFPL1O75677 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RFPL1O75677 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.58■□□□□ 0.56
RFPL1O75677 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.58■□□□□ 0.56
RFPL1O75677 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.58■□□□□ 0.56
RFPL1O75677 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.58■□□□□ 0.56
RFPL1O75677 RN7SL850P-201ENST00000579959 291 ntBASIC18.58■□□□□ 0.56
RFPL1O75677 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.58■□□□□ 0.56
RFPL1O75677 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFPL1O75677 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFPL1O75677 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.58■□□□□ 0.56
RFPL1O75677 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.58■□□□□ 0.56
RFPL1O75677 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RFPL1O75677 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFPL1O75677 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.58■□□□□ 0.56
RFPL1O75677 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFPL1O75677 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFPL1O75677 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms