Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 AC139795.1-202ENST00000500444 432 ntBASIC16.59■□□□□ 0.25
PFDN1O60925 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PFDN1O60925 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PFDN1O60925 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PFDN1O60925 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.59■□□□□ 0.25
PFDN1O60925 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PFDN1O60925 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.59■□□□□ 0.25
PFDN1O60925 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PFDN1O60925 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
PFDN1O60925 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN1O60925 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PFDN1O60925 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN1O60925 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.58■□□□□ 0.25
PFDN1O60925 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.58■□□□□ 0.25
PFDN1O60925 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PFDN1O60925 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN1O60925 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN1O60925 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN1O60925 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN1O60925 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PFDN1O60925 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PFDN1O60925 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.58■□□□□ 0.24
PFDN1O60925 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PFDN1O60925 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.58■□□□□ 0.24
PFDN1O60925 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.58■□□□□ 0.24
PFDN1O60925 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PFDN1O60925 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PFDN1O60925 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.58■□□□□ 0.24
PFDN1O60925 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PFDN1O60925 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN1O60925 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PFDN1O60925 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PFDN1O60925 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.57■□□□□ 0.24
PFDN1O60925 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.57■□□□□ 0.24
PFDN1O60925 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PFDN1O60925 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.57■□□□□ 0.24
PFDN1O60925 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.57■□□□□ 0.24
PFDN1O60925 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PFDN1O60925 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PFDN1O60925 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN1O60925 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PFDN1O60925 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PFDN1O60925 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PFDN1O60925 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.56■□□□□ 0.24
PFDN1O60925 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PFDN1O60925 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
PFDN1O60925 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.56■□□□□ 0.24
PFDN1O60925 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PFDN1O60925 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PFDN1O60925 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms